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Let ${}_q\left[t\right]$ be the polynomial ring over the finite field ${}_q$, and let ${}_N$ be the subset of ${}_q\left[t\right]$ containing all polynomials of degree strictly less than N. Define D(N) to be the maximal cardinality of a set $A{\subseteq }_N$ for which A-A contains no squares of polynomials. By combining the polynomial Hardy-Littlewood circle method with the density increment technology developed by Pintz, Steiger and Szemerédi, we prove that $D\left(N\right)\ll q^N{\left(logN\right)}^7/N$.