Displaying similar documents to “The triangles method to build X -trees from incomplete distance matrices”

On the structure of path-like trees

F.A. Muntaner-Batle, Miquel Rius-Font (2008)

Discussiones Mathematicae Graph Theory

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We study the structure of path-like trees. In order to do this, we introduce a set of trees that we call expandable trees. In this paper we also generalize the concept of path-like trees and we call such generalization generalized path-like trees. As in the case of path-like trees, generalized path-like trees, have very nice labeling properties.

On a matching distance between rooted phylogenetic trees

Damian Bogdanowicz, Krzysztof Giaro (2013)

International Journal of Applied Mathematics and Computer Science

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The Robinson-Foulds (RF) distance is the most popular method of evaluating the dissimilarity between phylogenetic trees. In this paper, we define and explore in detail properties of the Matching Cluster (MC) distance, which can be regarded as a refinement of the RF metric for rooted trees. Similarly to RF, MC operates on clusters of compared trees, but the distance evaluation is more complex. Using the graph theoretic approach based on a minimum-weight perfect matching in bipartite graphs,...

Distances between rooted trees

Bohdan Zelinka (1991)

Mathematica Bohemica

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Two types of a distance between isomorphism classes of graphs are adapted for rooted trees.

Codings and operators in two genetic algorithms for the leaf-constrained minimum spanning tree problem

Bryant Julstrom (2004)

International Journal of Applied Mathematics and Computer Science

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The features of an evolutionary algorithm that most determine its performance are the coding by which its chromosomes represent candidate solutions to its target problem and the operators that act on that coding. Also, when a problem involves constraints, a coding that represents only valid solutions and operators that preserve that validity represent a smaller search space and result in a more effective search. Two genetic algorithms for the leaf-constrained minimum spanning tree problem...