Displaying similar documents to “RNA packaging motor: From structure to quantum mechanical modelling and sequential-stochastic mechanism.”

Computer Simulation of Protein-Protein Association in Photosynthesis

I.B. Kovalenko, A.M. Abaturova, A.N. Diakonova, O.S. Knyazeva, D.M. Ustinin, S.S. Khruschev, G.Yu. Riznichenko, A.B. Rubin (2011)

Mathematical Modelling of Natural Phenomena

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The paper is devoted to the method of computer simulation of protein interactions taking part in photosynthetic electron transport reactions. Using this method we have studied kinetic characteristics of protein-protein complex formation for four pairs of proteins involved in photosynthesis at a variety of ionic strength values. Computer simulations describe non-monotonic dependences of complex formation rates on the ionic strength as the ...

Mathematical modelling of molecule evolution in protocells

Dariusz Myszor, Krzysztof A. Cyran (2013)

International Journal of Applied Mathematics and Computer Science

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In this article, we analyse the process of the emergence of RNA polynucleotides located in an enclosed environment, at an early stage of the RNA world. Therefore we prepared a mathematical model, composed of a set of differential equations, which simulates the behaviour of an early biological system bounded by a protocell membrane. There is evidence that enclosed environments were available on the primordial Earth. There are also experimental proofs that RNA strands can develop in these...

SV40 assembly in vivo and in vitro.

Oppenheim, Ariella, Ben-Nun-Shaul, O., Mukherjee, S., Abd-El-Latif, M. (2008)

Computational & Mathematical Methods in Medicine

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Computer simulation of the atomic behaviour in condensed phases.

Antoni Giró Roca, Joan Angel Padró (1987)

Qüestiió

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Molecular dynamics simulation method for the study of condensed phases of matter is described in this paper. Computer programs for the simulation of atomic motion have been developed. Time-saving techniques, like the cellular method have been incorporated in order to optimize the available computer resources. We have applied this method to the simulation of Argon near its melting point. Differences in the structure, thermodynamic properties and time correlation functions of solid and...