On energy conservation of the simplified Takahashi-Imada method

Ernst Hairer; Robert I. McLachlan; Robert D. Skeel

ESAIM: Mathematical Modelling and Numerical Analysis (2009)

  • Volume: 43, Issue: 4, page 631-644
  • ISSN: 0764-583X

Abstract

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In long-time numerical integration of Hamiltonian systems, and especially in molecular dynamics simulation, it is important that the energy is well conserved. For symplectic integrators applied with sufficiently small step size, this is guaranteed by the existence of a modified Hamiltonian that is exactly conserved up to exponentially small terms. This article is concerned with the simplified Takahashi-Imada method, which is a modification of the Störmer-Verlet method that is as easy to implement but has improved accuracy. This integrator is symmetric and volume-preserving, but no longer symplectic. We study its long-time energy conservation and give theoretical arguments, supported by numerical experiments, which show the possibility of a drift in the energy (linear or like a random walk). With respect to energy conservation, this article provides empirical and theoretical data concerning the importance of using a symplectic integrator.

How to cite

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Hairer, Ernst, McLachlan, Robert I., and Skeel, Robert D.. "On energy conservation of the simplified Takahashi-Imada method." ESAIM: Mathematical Modelling and Numerical Analysis 43.4 (2009): 631-644. <http://eudml.org/doc/250589>.

@article{Hairer2009,
abstract = { In long-time numerical integration of Hamiltonian systems, and especially in molecular dynamics simulation, it is important that the energy is well conserved. For symplectic integrators applied with sufficiently small step size, this is guaranteed by the existence of a modified Hamiltonian that is exactly conserved up to exponentially small terms. This article is concerned with the simplified Takahashi-Imada method, which is a modification of the Störmer-Verlet method that is as easy to implement but has improved accuracy. This integrator is symmetric and volume-preserving, but no longer symplectic. We study its long-time energy conservation and give theoretical arguments, supported by numerical experiments, which show the possibility of a drift in the energy (linear or like a random walk). With respect to energy conservation, this article provides empirical and theoretical data concerning the importance of using a symplectic integrator. },
author = {Hairer, Ernst, McLachlan, Robert I., Skeel, Robert D.},
journal = {ESAIM: Mathematical Modelling and Numerical Analysis},
keywords = {Symmetric and symplectic integrators; geometric numerical integration; modified differential equation; energy conservation; Hénon-Heiles problem; N-body problem in molecular dynamics.; symmetric and symplectic integrators; geometric numerical integration},
language = {eng},
month = {7},
number = {4},
pages = {631-644},
publisher = {EDP Sciences},
title = {On energy conservation of the simplified Takahashi-Imada method},
url = {http://eudml.org/doc/250589},
volume = {43},
year = {2009},
}

TY - JOUR
AU - Hairer, Ernst
AU - McLachlan, Robert I.
AU - Skeel, Robert D.
TI - On energy conservation of the simplified Takahashi-Imada method
JO - ESAIM: Mathematical Modelling and Numerical Analysis
DA - 2009/7//
PB - EDP Sciences
VL - 43
IS - 4
SP - 631
EP - 644
AB - In long-time numerical integration of Hamiltonian systems, and especially in molecular dynamics simulation, it is important that the energy is well conserved. For symplectic integrators applied with sufficiently small step size, this is guaranteed by the existence of a modified Hamiltonian that is exactly conserved up to exponentially small terms. This article is concerned with the simplified Takahashi-Imada method, which is a modification of the Störmer-Verlet method that is as easy to implement but has improved accuracy. This integrator is symmetric and volume-preserving, but no longer symplectic. We study its long-time energy conservation and give theoretical arguments, supported by numerical experiments, which show the possibility of a drift in the energy (linear or like a random walk). With respect to energy conservation, this article provides empirical and theoretical data concerning the importance of using a symplectic integrator.
LA - eng
KW - Symmetric and symplectic integrators; geometric numerical integration; modified differential equation; energy conservation; Hénon-Heiles problem; N-body problem in molecular dynamics.; symmetric and symplectic integrators; geometric numerical integration
UR - http://eudml.org/doc/250589
ER -

References

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  1. S. Blanes, F. Casas and A. Murua, On the numerical integration of ordinary differential equations by processed methods. SIAM J. Numer. Anal.42 (2004) 531–552.  
  2. J.C. Butcher, The effective order of Runge-Kutta methods, in Proceedings of Conference on the Numerical Solution of Differential Equations, J.L. Morris Ed., Lect. Notes Math.109 (1969) 133–139.  
  3. P. Chartier, E. Faou and A. Murua, An algebraic approach to invariant preserving integrators: the case of quadratic and Hamiltonian invariants. Numer. Math.103 (2006) 575–590.  
  4. D. Cottrell and P.F. Tupper, Energy drift in molecular dynamics simulations. BIT47 (2007) 507–523.  
  5. E. Faou, E. Hairer and T.-L. Pham, Energy conservation with non-symplectic methods: examples and counter-examples. BIT44 (2004) 699–709.  
  6. E. Hairer and C. Lubich, Symmetric multistep methods over long times. Numer. Math.97 (2004) 699–723.  
  7. E. Hairer, C. Lubich and G. Wanner, Geometric Numerical Integration, Structure-Preserving Algorithms for Ordinary Differential Equations, Springer Series in Computational Mathematics31. Springer-Verlag, Berlin, 2nd Edition (2006).  
  8. R.I. McLachlan and M. Perlmutter, Energy drift in reversible time integration. J. Phys. A37 (2004) L593–L598.  
  9. I.P. Omelyan, Extrapolated gradientlike algorithms for molecular dynamics and celestial mechanics simulations. Phys. Rev. E74 (2006) 036703.  
  10. G. Rowlands, A numerical algorithm for Hamiltonian systems. J. Comput. Phys.97 (1991) 235–239.  
  11. R.D. Skeel, G. Zhang and T. Schlick, A family of symplectic integrators: stability, accuracy, and molecular dynamics applications. SIAM J. Sci. Comput.18 (1997) 203–222.  
  12. R.D. Skeel, What makes molecular dynamics work? SIAM J. Sci. Comput.31 (2009) 1363–1378.  
  13. D. Stoffer, On reversible and canonical integration methods. Technical Report SAM-Report No. 88-05, ETH-Zürich, Switzerland (1988).  
  14. M. Takahashi and M. Imada, Monte Carlo calculation of quantum systems. II. Higher order correction. J. Phys. Soc. Jpn.53 (1984) 3765–3769.  
  15. P.F. Tupper, Ergodicity and the numerical simulation of Hamiltonian systems. SIAM J. Appl. Dyn. Syst.4 (2005) 563–587.  
  16. J. Wisdom, M. Holman and J. Touma, Symplectic correctors, in Integration Algorithms and Classical Mechanics, J.E. Marsden, G.W. Patrick and W.F. Shadwick Eds., Amer. Math. Soc., Providence R.I. (1996) 217–244.  

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