Integrating Instance-level and Attribute-level Knowledge into Document Clustering
Jinlong Wang, Shunyao Wu, Gang Li, Zhe Wei (2011)
Computer Science and Information Systems
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Jinlong Wang, Shunyao Wu, Gang Li, Zhe Wei (2011)
Computer Science and Information Systems
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Jianmin Zhang, Shengyu Shen, Jun Zhang, Weixia Xu, Sikun Li (2011)
Computer Science and Information Systems
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David F. Barrero, Antonio González-Pardo, David Camacho, María D. R-Moreno (2010)
Computer Science and Information Systems
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Barbara Dunin-Kęplicz, Rineke Verbrugge, Micha l Ślizak (2010)
Computer Science and Information Systems
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Tao Liao, Yongjie Zhang, Peter M. Kekenes-Huskey, Yuhui Cheng, Anushka Michailova, Andrew D. McCulloch, Michael Holst, J. Andrew McCammon (2013)
Molecular Based Mathematical Biology
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Multi-scale modeling plays an important role in understanding the structure and biological functionalities of large biomolecular complexes. In this paper, we present an efficient computational framework to construct multi-scale models from atomic resolution data in the Protein Data Bank (PDB), which is accelerated by multi-core CPU and programmable Graphics Processing Units (GPU). A multi-level summation of Gaussian kernel functions is employed to generate implicit models for biomolecules....
Christian Johansson, Fredrik Wernstedt, Paul Davidsson (2010)
Computer Science and Information Systems
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Nuno Oliveira, Maria João Varanda Pereira, Pedro Rangel Henriques, Daniela da Cruz, Bastian Cramer (2010)
Computer Science and Information Systems
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C. Y. Fong, M. Shaughnessy, L. Damewood, L. H. Yang (2012)
Nanoscale Systems: Mathematical Modeling, Theory and Applications
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Since the term “spintronics” was conceived in 1996, there have been several directions taken to develop new semiconductor-based magnetic materials for device applications using spin, or spin and charge, as the operational paradigm. Anticipating their integration into mature semiconductor technologies, one direction is to make use of materials involving Si. In this review, we focus on the progress made, since 2005, in Si-based half metallic spintronic materials. In addition to commenting...
Sandeep Kumar Singh, F.M. Peeters (2013)
Nanoscale Systems: Mathematical Modeling, Theory and Applications
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The eigenmodes and the vibrational density of states of the ground state configuration of graphene clusters are calculated using atomistic simulations. The modified Brenner potential is used to describe the carbon-carbon interaction and carbon-hydrogen interaction in case of H-passivated edges. For a given configuration of the C-atoms the eigenvectors and eigenfrequencies of the normal modes are obtained after diagonalisation of the dynamical matrix whose elements are the second derivative...
Goran Sladić, Branko Milosavljević, Zora Konjović, Milan Vidaković (2011)
Computer Science and Information Systems
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Nikolay A. Simakov, Maria G. Kurnikova (2013)
Molecular Based Mathematical Biology
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Poisson and Poisson-Boltzmann equations (PE and PBE) are widely used in molecular modeling to estimate the electrostatic contribution to the free energy of a system. In such applications, PE often needs to be solved multiple times for a large number of system configurations. This can rapidly become a highly demanding computational task. To accelerate such calculations we implemented a graphical processing unit (GPU) PE solver described in this work. The GPU solver performance is compared...