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On the graph labellings arising from phylogenetics

Weronika Buczyńska, Jarosław Buczyński, Kaie Kubjas, Mateusz Michałek (2013)

Open Mathematics

We study semigroups of labellings associated to a graph. These generalise the Jukes-Cantor model and phylogenetic toric varieties defined in [Buczynska W., Phylogenetic toric varieties on graphs, J. Algebraic Combin., 2012, 35(3), 421–460]. Our main theorem bounds the degree of the generators of the semigroup by g + 1 when the graph has first Betti number g. Also, we provide a series of examples where the bound is sharp.

On the refinements of a polyhedral subdivision.

Francisco Santos (2001)

Collectanea Mathematica

Let pi: P --> Q be an affine projection map between two polytopes P and Q. Billera and Sturmfels introduced in 1992 the concept of polyhedral subdivisions of Q induced by pi (or pi-induced) and the fiber polytope of the projection: a polytope Sygma(P,pi) of dimension dim(P)-dim(Q) whose faces are in correspondence with the coherent pi-induced subdivisions (or pi-coherent subdivisions). In this paper we investigate the structure of the poset of pi-induced refinements of a pi-induced subdivision....

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