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KIS: An automated attribute induction method for classification of DNA sequences

Rafał Biedrzycki, Jarosław Arabas (2012)

International Journal of Applied Mathematics and Computer Science

This paper presents an application of methods from the machine learning domain to solving the task of DNA sequence recognition. We present an algorithm that learns to recognize groups of DNA sequences sharing common features such as sequence functionality. We demonstrate application of the algorithm to find splice sites, i.e., to properly detect donor and acceptor sequences. We compare the results with those of reference methods that have been designed and tuned to detect splice sites. We also show...

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