Displaying 701 – 720 of 1226

Showing per page

A sparse dynamic programming algorithm for alignment with non-overlapping inversions

Alair Pereira Do Lago, Ilya Muchnik, Casimir Kulikowski (2005)

RAIRO - Theoretical Informatics and Applications - Informatique Théorique et Applications

Alignment of sequences is widely used for biological sequence comparisons, and only biological events like mutations, insertions and deletions are considered. Other biological events like inversions are not automatically detected by the usual alignment algorithms, thus some alternative approaches have been tried in order to include inversions or other kinds of rearrangements. Despite many important results in the last decade, the complexity of the problem of alignment with inversions is still unknown....

A sparse dynamic programming algorithm for alignment with non-overlapping inversions

Alair Pereira do Lago, Ilya Muchnik, Casimir Kulikowski (2010)

RAIRO - Theoretical Informatics and Applications

Alignment of sequences is widely used for biological sequence comparisons, and only biological events like mutations, insertions and deletions are considered. Other biological events like inversions are not automatically detected by the usual alignment algorithms, thus some alternative approaches have been tried in order to include inversions or other kinds of rearrangements. Despite many important results in the last decade, the complexity of the problem of alignment with inversions is...

A spectral bound for graph irregularity

Felix Goldberg (2015)

Czechoslovak Mathematical Journal

The imbalance of an edge e = { u , v } in a graph is defined as i ( e ) = | d ( u ) - d ( v ) | , where d ( · ) is the vertex degree. The irregularity I ( G ) of G is then defined as the sum of imbalances over all edges of G . This concept was introduced by Albertson who proved that I ( G ) 4 n 3 / 27 (where n = | V ( G ) | ) and obtained stronger bounds for bipartite and triangle-free graphs. Since then a number of additional bounds were given by various authors. In this paper we prove a new upper bound, which improves a bound found by Zhou and Luo in 2008. Our bound involves the...

A stationary random graph of no growth rate

Ádám Timár (2014)

Annales de l'I.H.P. Probabilités et statistiques

We present a random automorphism-invariant subgraph of a Cayley graph such that with probability 1 its exponential growth rate does not exist.

A strongly non-Ramsey uncountable graph

Péter Komjáth (1997)

Fundamenta Mathematicae

It is consistent that there exists a graph X of cardinality 1 such that every graph has an edge coloring with 1 colors in which the induced copies of X (if there are any) are totally multicolored (get all possible colors).

Currently displaying 701 – 720 of 1226