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Parallelization of artificial immune systems using a massive parallel approach via modern GPUs

Khun, Jiří, Šimeček, Ivan (2015)

Programs and Algorithms of Numerical Mathematics

Parallelization is one of possible approaches for obtaining better results in terms of algorithm performance and overcome the limits of the sequential computation. In this paper, we present a study of parallelization of the opt-aiNet algorithm which comes from Artificial Immune Systems, one part of large family of population based algorithms inspired by nature. The opt-aiNet algorithm is based on an immune network theory which incorporates knowledge about mammalian immune systems in order to create...

Parameter estimation in non-linear mixed effects models with SAEM algorithm: extension from ODE to PDE

E. Grenier, V. Louvet, P. Vigneaux (2014)

ESAIM: Mathematical Modelling and Numerical Analysis - Modélisation Mathématique et Analyse Numérique

Parameter estimation in non linear mixed effects models requires a large number of evaluations of the model to study. For ordinary differential equations, the overall computation time remains reasonable. However when the model itself is complex (for instance when it is a set of partial differential equations) it may be time consuming to evaluate it for a single set of parameters. The procedures of population parametrization (for instance using SAEM algorithms) are then very long and in some cases...

Parametric inference for mixed models defined by stochastic differential equations

Sophie Donnet, Adeline Samson (2008)

ESAIM: Probability and Statistics

Non-linear mixed models defined by stochastic differential equations (SDEs) are considered: the parameters of the diffusion process are random variables and vary among the individuals. A maximum likelihood estimation method based on the Stochastic Approximation EM algorithm, is proposed. This estimation method uses the Euler-Maruyama approximation of the diffusion, achieved using latent auxiliary data introduced to complete the diffusion process between each pair of measurement instants. A tuned...

Parareal operator splitting techniques for multi-scale reaction waves: Numerical analysis and strategies

Max Duarte, Marc Massot, Stéphane Descombes (2011)

ESAIM: Mathematical Modelling and Numerical Analysis - Modélisation Mathématique et Analyse Numérique

In this paper, we investigate the coupling between operator splitting techniques and a time parallelization scheme, the parareal algorithm, as a numerical strategy for the simulation of reaction-diffusion equations modelling multi-scale reaction waves. This type of problems induces peculiar difficulties and potentially large stiffness which stem from the broad spectrum of temporal scales in the nonlinear chemical source term as well as from the presence of large spatial gradients in the reactive...

Parareal operator splitting techniques for multi-scale reaction waves: Numerical analysis and strategies

Max Duarte, Marc Massot, Stéphane Descombes (2011)

ESAIM: Mathematical Modelling and Numerical Analysis

In this paper, we investigate the coupling between operator splitting techniques and a time parallelization scheme, the parareal algorithm, as a numerical strategy for the simulation of reaction-diffusion equations modelling multi-scale reaction waves. This type of problems induces peculiar difficulties and potentially large stiffness which stem from the broad spectrum of temporal scales in the nonlinear chemical source term as well as from the presence of large spatial gradients in the reactive...

Currently displaying 41 – 60 of 279