Practical persistence for differential delay models of population interactions.
Pravděpodobnost vymření kontinuální kultivace
Precise spectral asymptotics for nonautonomous logistic equations of population dynamics in a ball.
Problems with classical models of sex-ratio evolution
The classical theory of the sex-ratio evolution, known as the sex-ratio game, is based on the maximization of the number of grandchildren, treated as a fitness measure of a female producing offspring of the sex ratio that is coded in her genes. The theory predicts that it is more profitable to produce offspring with less numerous sex. We can find in the literature mutually exclusive conclusions based on this prediction: some textbooks say that populations with the equal number of sons and daughters...
Proč má DNA tři terminační triplety a jen jeden iniciační?
Progressive diseases: Interpretation of genetic data.
Propagation of Growth Uncertainty in a Physiologically Structured Population
In this review paper we consider physiologically structured population models that have been widely studied and employed in the literature to model the dynamics of a wide variety of populations. However in a number of cases these have been found inadequate to describe some phenomena arising in certain real-world applications such as dispersion in the structure variables due to growth uncertainty/variability. Prompted by this, we described two recent...
Properties of a singular value decomposition based dynamical model of gene expression data
Recently, data on multiple gene expression at sequential time points were analyzed using the Singular Value Decomposition (SVD) as a means to capture dominant trends, called characteristic modes, followed by the fitting of a linear discrete-time dynamical system in which the expression values at a given time point are linear combinations of the values at a previous time point. We attempt to address several aspects of the method. To obtain the model, we formulate a nonlinear optimization problem...
Protector control: Extension to a class of nonlinear distributed systems
We present an extension of the protector control scheme introduced for the linear case in a previous work to a class of nonlinear systems. The systems considered are assumed to have a finite propagation velocity while the initial state is subject to a spreading disturbance. We characterize such a control first by using the remediability approach to the resulting nonlinear delay system, and then by coupling families of transformations and the delay approach. To illustrate this work, we provide a...
Qualitative behavior of giving up smoking models.
Qualitative properties of a predator-prey model with delay.
Quality improvement of rule-based gene group descriptions using information about GO terms importance occurring in premises of determined rules
In this paper we present a method for evaluating the importance of GO terms which compose multi-attribute rules. The rules are generated for the purpose of biological interpretation of gene groups. Each multi-attribute rule is a combination of GO terms and, based on relationships among them, one can obtain a functional description of gene groups. We present a method which allows evaluating the influence of a given GO term on the quality of a rule and the quality of a whole set of rules. For each...
Random coefficient differential models of growth of anaerobic photosynthetic bacteria.
Random coefficients bifurcating autoregressive processes
This paper presents a new model of asymmetric bifurcating autoregressive process with random coefficients. We couple this model with a Galton−Watson tree to take into account possibly missing observations. We propose least-squares estimators for the various parameters of the model and prove their consistency, with a convergence rate, and asymptotic normality. We use both the bifurcating Markov chain and martingale approaches and derive new results in both these frameworks.
Random real trees
We survey recent developments about random real trees, whose prototype is the Continuum Random Tree (CRT) introduced by Aldous in 1991. We briefly explain the formalism of real trees, which yields a neat presentation of the theory and in particular of the relations between discrete Galton-Watson trees and continuous random trees. We then discuss the particular class of self-similar random real trees called stable trees, which generalize the CRT. We review several important results concerning stable...
Rational Constants of Generic LV Derivations and of Monomial Derivations
We describe the fields of rational constants of generic four-variable Lotka-Volterra derivations. Thus, we determine all rational first integrals of the corresponding systems of differential equations. Such systems play a role in population biology, laser physics and plasma physics. They are also an important part of derivation theory, since they are factorizable derivations. Moreover, we determine the fields of rational constants of a class of monomial derivations.
Reaction-diffusion systems: stabilizing effect of conditions described by quasivariational inequalities
Reaction-diffusion systems are studied under the assumptions guaranteeing diffusion driven instability and arising of spatial patterns. A stabilizing influence of unilateral conditions given by quasivariational inequalities to this effect is described.
Recent developments in computational gene recognition.
Reclassification, diversity and elementary number theory
Réflexions sur les méthodes de parenté